This is possible using the consensus command. We need the reference sequence reference.fa in the fasta format and an indexed VCF with the variants calls.bcf . ... <看更多>

Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment. - GitHub - cbg-ethz/ConsensusFixer: ... ... <看更多>

I have 2 Strings of DNA Sequences (consisting of ACGT), which differ in one or two spots. Finding the differences is trivial, so let's just ... ... <看更多>

Panel (a) shows a sequence gap-free alignment. Each row corresponds to a contiguous 15 base pair sequence of DNA (e.g. row 1 could be a ... ... <看更多>